垂直棒棒糖图(vertical lollipop chart)
简介
形如棒棒糖,下面是一条线(棒棒糖的棍子),线上面是一个点(糖),故名。
数据说明
输入数据为3列:第1列是X轴标的名字,第2列是高度数值,第3列是点上标注的数值(可与第2列一样,也可以与第2列不一样,例如高度表示-log10p,而标注为基因数)
输入数据为4列:第1列是X轴标的名字,第2列是高度数值,第3列是点上标注的数值(可与第2列一样,也可以与第2列不一样,例如高度表示-log10p,而标注为基因数),第4列为分组(最多6组)
论文例子
Transcriptome, Spliceosome and Editome Expression Patterns of the Porcine Endometrium in Response to a Single Subclinical Dose of Salmonella Enteritidis Lipopolysaccharide. Fig3
写作说明
Lollipop chart of the top 10 Gene Ontology (GO) terms for each GO aspect (biological process; cellular components; molecular function), scattered according to -log10 p-value. Numbers in circles refer to the number of DEGs annotated to the specific GO term.
如何引用?
建议直接写网址。4400+篇
google学术,3700+篇
知网学术
正式引用:Tang D, Chen M, Huang X, Zhang G, Zeng L, Zhang G, Wu S, Wang Y.
SRplot: A free online platform for data visualization and graphing. PLoS One. 2023 Nov 9;18(11):e0294236. doi: 10.1371/journal.pone.0294236. PMID: 37943830.
方法章节:Heatmap was plotted by https://www.bioinformatics.com.cn (last accessed on 10 Oct 2024), an online platform for data analysis and visualization.
致谢章节:We thank Mingjie Chen (Shanghai NewCore Biotechnology Co., Ltd.) for providing data analysis and visualization support.